Speaker
Peter Bankhead
(University of Edinbrugh)
Description
QuPath is a popular open-source platform for visualizing, annotating and analyzing complex images - including whole slide and highly multiplexed datasets. QuPath is inspired and influenced by ImageJ and Fiji, but also quite different.
This workshop will show how experienced ImageJ and Fiji users can benefit from QuPath, and vice versa. It will show how to use ImageJ and QuPath together interactively, as well as through macros and scripts. We'll also look at some key similarities and differences between the software, to help decide when and where to use each application.
| Target audience | Intermediate users, Advanced users, Beginner developers, Intermediate developers, Advanced developers |
|---|---|
| Keywords | qupath, fiji, imagej, pathology, whole slide, microscopy, brightfield, multiplexed, annotation |
