-
14:00
Enhanced Bacterial Cytological Profiling with super resolution techniques and fluorescent D amino acids
-
Joseph Ratcliff
(University of Warwick)
-
14:00
Leonardo: a toolset to remove sample-induced aberrations in light sheet microscopy images
-
Yu Liu
(Technical University of Munich, TUM)
-
14:00
An AI-based pipeline to extract predictive mechano-features in Triple Negative Breast Cancers
-
Emanuele Martini
Mattia Tonani
(IFOM)
-
14:00
Quantifying the Heterogeneity of DNA Interactions in AFM Images
-
Max Gamill
(University of Sheffield)
-
14:00
FLUTE: A Python GUI for interactive phasor analysis of FLIM data
-
Chiara Stringari
(CNRS - Ecole Polytechnique)
-
14:00
Robust detection and quantification of beating cells in microscopic 2D videos of cardiomyocytes
-
Oleksiy Nosov
(DNTOX GmbH)
-
14:00
Fractal: An open-source framework for reproducible bioimage analysis at scale using OME-Zarrs
-
Joel Lüthi
(University of Zurich)
-
14:00
Building Foundations for AI-Driven Bioimage Analysis: Infrastructure and Annotation Platforms
-
Nils Mechtel
(KTH Royal Institute of Technology)
-
14:00
Unsupervised Denoising for Signal-Dependent and Row-Correlated Imaging Noise
-
Benjamin Salmon
(University of Birmingham)
-
14:00
How To Train Your Image Analyst: Perspectives from Upskilled Biologists
-
Maria Traver
(NIH / NIAID)
-
14:00
Continuous, interpretable, and transformation-invariant Morphometric for dynamic shape quantification
-
Roua Rouatbi
(TU Dresden)
-
14:00
An AI approach for timing analysis of cytokinesis from microscopy data
-
Thomas Bonte
(Université PSL - Institut Curie)
-
14:00
RNA point cloud segmentation for image-based spatial transcriptomics
-
Thomas Defard
(Institut Pasteur, Ecole des Mines)
-
14:00
Enhancing Synaptic-Resolution Connectomics with an Open-Source AI Ecosystem
-
Samia Mohinta
(University of Cambridge, UK)
-
14:00
napari-phasors: Integrating Hyperspectral and FLIM Data Analysis into an Open-Source Bioimaging Framework
-
Marcelo Leomil Zoccoler
(DFG Cluster of Excellence Physics of Life - TU Dresden)
-
14:00
**multiview-stitcher: a modular and extensible toolbox for scalable image registration and fusion in python
-
Marvin Albert
(Institut Pasteur)
-
14:00
METEOR: Enabling precise 3D correlative cryo-FIB milling for high throughput cryo-ET lamella production
-
Kevin Homberg
(Delmic Cryo B.V)
-
14:00
Create web-based OME-Zarr galleries with Zarrcade
-
Konrad Rokicki
(HHMI Janelia Research Campus)
-
14:00
Taggathon on BIII.eu: contributing to a unique database of image analysis tools and workflows
-
Perrine Paul-Gilloteaux
(University of Nantes)
-
14:00
A QuPath extension for Data-driven Microscopy
-
Michael S. Nelson
(University of Wisconsin, Madison)
-
14:00
Integrative Open-Source Analysis Pipeline of RNA In Situ Hybridization Immunofluorescence Images
-
Nur Muhammad Renollet
(University of Michigan)
-
14:00
PIXIMI: A web-based deep learning tool for biomedical image analysis
-
Nodar Gogoberidze
(Broad Institute)
-
14:00
Too good to be true: the perils of applying image quality metrics in fluorescence microscopy
-
Siân Culley
(King's College London)
-
14:00
Pycellin: a graph-based framework to analyze cell lineages
-
Laura Xénard
(Institut Pasteur)
-
14:00
FISBe: A real-world benchmark dataset for instance segmentation of long-range thin filamentous structures
-
Lisa Mais
(Max Delbrück Center for Molecular Medicine in the Helmholtz Association (Max Delbrück Center))
-
14:00
Integrating Shape and Function: Identifying growth drivers and their morphological expression in Gastric Tumor Organoids.
-
Maleeha Hassan
(Technical University of Dresden)
-
14:00
BIOP-desktop , a versioned computer for image analysis in life sciences
-
Romain Guiet
(EMBL)
-
14:00
Digital pathology and artificial intelligence-based approaches to characterize the complex interactions between cellular components of the tumor microenvironment and their spatial distribution
-
Marika Viatore
(Università degli Studi di Milano)
-
14:00
3D quantitative image analysis of cell fate acquisition during lateral inhibition
-
Minh-Son Phan
(Institut Pasteur Paris)
-
14:00
Self-supervised learning for sample localization on cryoem grids for tomogram acquisition
-
Ricardo M. Sánchez L.
(EMBL)
-
14:00
Data-driven Unsupervised and Sparsely-Supervised Segmentation
-
Sheida Kordasiabi
(Human Technopole)
-
14:00
DaCapo: a modular deep learning framework for scalable 3D image segmentation
-
Marwan Zouinkhi
(HHMI - Janelia)
-
14:00
A nextflow-based end to end workflow for decoding of in situ sequencing data
-
Nima Vakili
(EMBL/GSK)
-
14:00
Virtual Embryo Zoo: A Web-Based Tool for Embryogenesis Cell Tracking Visualization
-
Teun Huijben
(Chan Zuckerberg Biohub San Francisco)
-
14:00
Investigating DNA damage with Atomic Force Microscopy and TopoStats
-
Thomas Catley
(University of Sheffield)
-
14:00
Two ways of quantifying inflammation in histopathology slices of the mouse pancreas
-
Maria Theiss
(Harvard Medical School)
-
14:00
Joined segmentation of nuclei and cells
-
Thierry Pécot
(Rennes University)
-
14:00
Enabling Access to Bioimage Analysis Tools on University Cluster
-
Ranit Karmakar
(Harvard Medical School)
-
14:00
Foreground-aware virtual staining for 3D nuclear morphometry
-
Paula Llanos
(Broad Institute)
-
14:00
The Human Protein Atlas in OMERO: an accessible dataset for teaching purposes
-
Rémy Dornier
(EPFL - SV - PTECH - PTBIOP)
-
14:00
TOMOMAN•PY - A Python-Based Suite for Handling Large cryo-ET Datasets
-
Philipp S. Erdmann
(Human Technopole)
-
14:00
Client-Server Approach for Bioimage Analysis in the Deep Learning Era: Enhancing Extensibility and Accessibility
-
Ko Sugawara
(RIKEN BDR)
-
14:00
micronuclAI: Automated quantification of micronuclei for assessment of chromosomal instability
-
Miguel A. Ibarra-Arellano
(Institute for Computational Biomedicine, University Hospital Heidelberg)
-
14:00
AI-powered analysis of histopathological tissues to study of the tumor immune microenvironment
-
Rebecca Polidori
(University of Milan)
-
14:00
Probabilistic Framework for Calibrated Cell Tracking
-
Richard D. Paul
(Forschungszentrum Jülich GmbH)
-
14:00
InstanSeg: a fast, flexible and user-friendly cell segmentation method for brightfield and multichannel images
-
Thibaut Goldsborough
(University of Edinburgh)
-
14:00
Simplified processing for image-based cell profiling with pollen
-
Tom Ouellette
(University of Toronto/Ontario Institute for Cancer Research)
-
14:00
Contextual Segmentation of Large, High-dimensional Medical Images
-
Victoria Porter
(Queen's University Belfast)
-
14:00
MMV_H4Cells - a cell evaluation napari plugin
-
Lennart Kowitz
(Leibniz-Institut für Analytische Wissenschaften – ISAS – e.V.)
-
14:00
Mastodon – a Large-Scale Tracking and Track-Editing Framework for Large, Multi-View Images and Extensions for 3D Visualization and Lineage Comparison
-
Matthias Arzt
(MPI-CBG)
Stefan Hahmann
(TU Dresden)
-
14:00
Quantifying bacterial dynamics over a wide range of species with TrackMate-Omnipose
-
Marie Anselmet
(Institut Pasteur)
-
14:00
Potentials and limitations in the application of Convolutional Neural Networks for mosquito species identification using wing images
-
Kristopher Nolte
(Bernhard-Nocht-Institute for Tropical Medicine)
-
14:00
Robust segmentation and measurement of single bacterial cells within a chain
-
Octavio Reyes-Matte
(Max Planck Institute for Evolutionary Biology)
-
14:00
Single protein pinpointing in light microscopy using DNA-PAINT
-
Rafal Kowalewski
(Max Planck Institute of Biochemistry, Ludwig-Maximilians University of Munich)
-
14:00
Combining Incremental Deep Learning, Eye Tracking and Virtual Reality for Human-in-the-Loop Cell Tracking: a Progress Report
-
Samuel Pantze
(CASUS - Center for Advanced Systems Understanding)
-
16:15
OptiCell3D: inference of the mechanical properties of cells from 3D microscopy images
-
Kevin Yamauchi
(ETH Zurich)
