23–25 Oct 2024
Milan, Italy
Europe/Rome timezone

PlantSeg 2.0: powerful and user-friendly tissue segmentation

24 Oct 2024, 09:45
1h 30m
PIT.P01.011 (Human Technopole)

PIT.P01.011

Human Technopole

Speakers

Lorenzo Cerrone (University of Zurich) Qin Yu (EMBL Heidelberg)

Description

The workshop will introduce PlantSeg 2.0: a new version of the popular PlantSeg tool for segmentation of cells in tissues based on membrane staining, in 2D and in 3D. Together with the participants, we will step through the new napari-based GUI, learning to choose pre-trained networks, set the parameters, correct the results and launch headless jobs. No prior experience with PlantSeg is needed.

Target audience Beginner users, Intermediate users, Advanced users
Keywords Beginner users, Intermediate users, Advanced users

Presentation materials

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